Fitness data for PS417_00910 in Pseudomonas simiae WCS417

diguanylate cyclase
SEED: Sensory box/GGDEF family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -2.2 compare
ecofab LB in EcoFAB_3.5mL -0.5 -2.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.6 compare
phage P. simiae ORA MOI 0.1 +0.5 +2.1 compare
phage JP1 MOI 10 +0.5 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.0 compare
phage JP1 MOI 0.1 +0.6 +1.9 compare
phage JP1 MOI 10 +0.6 +1.6 compare
phage P. simiae OR Antrim MOI 1 +0.6 +2.1 compare
phage JP1 MOI 1 +0.6 +2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.2 compare
phage P. simiae Grant Run MOI 10 +0.7 +3.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.0 compare
phage P. simiae Grant Run MOI 10 +0.9 +5.1 compare