Fitness data for PS417_09050 in Pseudomonas simiae WCS417

transcriptional regulator
SEED: DNA-binding response regulator GltR, controls specific porins for the entry of glucose
KEGG: two-component system, OmpR family, response regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant control Vogels_fungal_media 0.1X -0.4 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.5 compare
stress 1-ethyl-3-methylimidazolium acetate 35 mM +0.4 +2.0 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.4 +0.8 compare
soil soil sample 4; outgrowth in LB +0.4 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +2.1 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.5 +1.1 compare
phage P. simiae OR Antrim MOI 1 +0.5 +1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.0 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.6 compare
soil soil sample 5; outgrowth in LB +0.6 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.9 compare
seeds Growth on radish seeds for 72 hours +0.7 +2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +3.9 compare
root root sample 6; outgrowth in LB +0.9 +1.8 compare