Fitness data for PS417_09035 in Pseudomonas simiae WCS417

hypothetical protein
SEED: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
soil soil sample 3; outgrowth in LB -1.9 -3.0 compare
phage JP1 MOI 1 -1.6 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 -1.8 compare
stress 2-Furfuraldehyde 0.06 vol% -1.5 -4.4 compare
stress 2-Furfuraldehyde 0.03 vol% -1.4 -3.4 compare
carbon source L-Valine (C) -1.3 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -2.3 compare
phage P. simiae Grant Run MOI 0.1 -1.1 -2.3 compare
stress L-Lysine 60 mM -1.0 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.0 -2.3 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.0 -2.2 compare
phage P. simiae ORA MOI 0.1 -0.9 -2.4 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.9 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 +1.5 compare
phage P. simiae Grant Run MOI 10 +1.2 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.8 +1.8 compare