Fitness data for PS417_08970 in Pseudomonas simiae WCS417

chemotaxis protein
SEED: Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
KEGG: methyl-accepting chemotaxis protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -3.2 compare
carbon source Carbon source L-Ornithine 5 mM -0.6 -2.1 compare
stress Spectinomycin 0.4 mg/ml -0.6 -2.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.8 compare
motility inner cut, LB soft agar motility assay -0.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.6 compare
phage P. simiae OR Antrim MOI 10 -0.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.3 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 +1.8 compare
liquid stress Scopoletin 1 mM; liquid stress +0.5 +2.1 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) +0.5 +2.3 compare
solid stress 80% Methanol 0.5 mM; solid stress +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.0 compare