Fitness data for PS417_08855 in Pseudomonas simiae WCS417

glycine/betaine ABC transporter substrate-binding protein
SEED: Glycine betaine/L-proline ABC transporter, glycine betaine/L-proline- binding/permease protein
KEGG: glycine betaine/proline transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
seeds Growth on radish seeds for 72 hours -0.8 -1.9 compare
motility outer cut, LB soft agar motility assay -0.8 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.7 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.3 compare
nophagecontrol Only library -0.6 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.6 compare
stress Bacitracin 1 mg/ml -0.6 -2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.9 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.5 -1.3 compare
carbon source Xylitol (C) -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.4 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.6 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.0 compare
soil soil sample 4; outgrowth in LB +0.7 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.2 compare
soil soil sample 3; outgrowth in LB +0.8 +2.6 compare