Fitness data for PS417_08805 in Pseudomonas simiae WCS417

hydroxypyruvate isomerase
SEED: Hydroxypyruvate isomerase (EC 5.3.1.22)
KEGG: hydroxypyruvate isomerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Inosine (C) -3.9 -13.2 compare
carbon source Inosine (C) -3.5 -9.7 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.9 -5.8 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.9 -7.0 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.6 -4.0 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.6 -6.9 compare
seeds Growth on radish seeds for 72 hours -0.6 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.4 compare
phage P. simiae ORA MOI 0.1 -0.4 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.4 compare
seeds Growth on radish seeds for 72 hours -0.4 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.1 compare
phage JP1 MOI 1 +0.4 +2.1 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x +0.5 +2.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +1.1 compare
root root sample 6; outgrowth in LB +0.5 +1.8 compare
phage JP1 MOI 10 +0.5 +1.4 compare