Fitness data for PS417_08655 in Pseudomonas simiae WCS417

pseudouridine synthase
SEED: Similar to ribosomal large subunit pseudouridine synthase A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
carbon source 2'-Deoxyinosine 5 mM (C) -1.0 -3.5 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.8 -3.2 compare
phage P. simiae OR Antrim MOI 10 -0.7 -3.1 compare
solid stress Fraxetin 3 mM; solid stress -0.7 -2.9 compare
stress Gentamicin 0.008 mg/ml -0.6 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.6 -3.9 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -2.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -2.1 compare
seeds Growth on radish seeds for 72 hours -0.6 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.5 compare
stress Neomycin 0.04 mg/ml -0.5 -2.3 compare
solid stress Fraxetin 3 mM; solid stress -0.5 -2.4 compare
carbon source L-Valine (C) +0.5 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +1.6 compare
root root sample 6; outgrowth in LB +0.5 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.1 compare
soil soil sample 7; outgrowth in LB +0.7 +3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +2.6 compare