Fitness data for PS417_08565 in Pseudomonas simiae WCS417

peptide methionine sulfoxide reductase
SEED: Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)
KEGG: peptide-methionine (R)-S-oxide reductase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil soil sample 7; outgrowth in LB -0.9 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -2.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.7 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.6 compare
seeds Growth on radish seeds for 72 hours -0.6 -2.1 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.6 -1.4 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +2.0 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x +0.6 +2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +1.8 compare
phage JP1 MOI 1 +0.6 +2.5 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x +0.6 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.7 +0.9 compare
phage P. simiae OR Antrim MOI 1 +0.7 +2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.8 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.5 +2.2 compare