Fitness data for PS417_08525 in Pseudomonas simiae WCS417

phospho-2-dehydro-3-deoxyheptonate aldolase
SEED: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)
KEGG: 3-deoxy-7-phosphoheptulonate synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -1.5 compare
soil soil sample 5; outgrowth in LB -0.5 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.0 compare
phage P. simiae Grant Run MOI 10 -0.5 -2.2 compare
phage P. simiae OR Antrim MOI 1 -0.5 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -2.0 compare
carbon source Carbon source L-Citrulline 5 mM -0.4 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.7 compare
carbon source L-Lactate (C) -0.4 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.8 compare
stress Phosphomycin 0.001 mg/ml +0.4 +1.2 compare
solid stress Fraxetin 2 mM; solid stress +0.4 +2.6 compare
soil soil sample 6; outgrowth in LB +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.3 compare