Fitness data for PS417_08505 in Pseudomonas simiae WCS417

membrane protein
SEED: putative membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -2.2 compare
root root sample 6; outgrowth in LB -0.9 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -1.0 compare
phage P. simiae ORA MOI 0.1 -0.8 -1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.8 -2.2 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.7 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -1.6 compare
liquid stress 80% Methanol 3 mM; liquid stress -0.6 -1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.6 -2.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.8 compare
phage moi 100 Time6-phageFRS -0.6 -1.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -0.9 compare
carbon source L-Leucine (C) -0.6 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +0.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.8 compare
carbon source Xylitol (C) +0.7 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +3.6 compare