Fitness data for PS417_08440 in Pseudomonas simiae WCS417

hypothetical protein
SEED: Possible periplasmic thiredoxin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.4 +2.0 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) +0.5 +2.3 compare
seeds Growth on radish seeds for 72 hours +0.5 +1.9 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x +0.5 +2.4 compare
root root sample 6; outgrowth in LB +0.5 +2.7 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.5 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +3.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.5 compare
seeds Growth on radish seeds for 72 hours +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +2.3 compare
soil soil sample 5; outgrowth in LB +0.6 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +4.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +3.4 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.7 +3.5 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.9 +5.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +3.1 compare