Fitness data for PS417_08305 in Pseudomonas simiae WCS417

transcriptional regulator
SEED: sensor histidine kinase
KEGG: two-component system, OmpR family, KDP operon response regulator KdpE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.7 compare
phage P. simiae ORA MOI 10 -0.8 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -2.8 compare
carbon source D-Trehalose (C) -0.7 -1.1 compare
stress methylglyoxal 0.032 vol% -0.7 -1.0 compare
stress Tetracycline 0.001 mg/ml -0.6 -2.0 compare
phage P. simiae OR Antrim MOI 1 -0.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +2.2 compare
soil soil sample 4; outgrowth in LB +0.5 +1.6 compare
phage P. simiae OR Antrim MOI 10 +0.5 +2.2 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.6 +2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.6 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.5 compare
soil soil sample 6; outgrowth in LB +0.7 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.8 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.5 compare