Fitness data for PS417_00760 in Pseudomonas simiae WCS417

ShlB family hemolysin secretion/activation protein
SEED: Channel-forming transporter/cytolysins activator of TpsB family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
stress Doxycycline hyclate 0.001 mg/ml -1.0 -5.4 compare
stress Tetracycline 0.001 mg/ml -0.7 -4.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.5 compare
carbon source Carbon source L-Citrulline 10 mM -0.3 -2.3 compare
carbon source RCH2_defined_glucose with MS_media 1x -0.3 -2.1 compare
carbon source Carbon source D-Mannitol 10 mM -0.3 -1.8 compare
soil soil sample 7; outgrowth in LB -0.3 -1.4 compare
soil soil sample 3; outgrowth in LB -0.3 -1.5 compare
carbon source Carbon source D-Mannitol 5 mM -0.2 -1.7 compare
carbon source D,L-Lactate (C) -0.2 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.6 compare
stress Neomycin 0.04 mg/ml +0.3 +2.3 compare
phage P. simiae OR Antrim MOI 1 +0.3 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.3 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +2.0 compare