Fitness data for PS417_07530 in Pseudomonas simiae WCS417

multidrug transporter
SEED: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps
KEGG: multidrug resistance protein, MATE family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress Cisplatin 0.01 mg/ml -1.9 -7.3 compare
seeds Growth on radish seeds for 72 hours -0.5 -2.1 compare
seeds Growth on radish seeds for 72 hours -0.5 -1.9 compare
phage Wcs_1 -0.5 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.2 compare
phage JP1 MOI 10 -0.4 -1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.4 +1.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.4 +1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +2.2 compare
soil soil sample 3; outgrowth in LB +0.4 +1.6 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.4 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.5 compare
soil soil sample 4; outgrowth in LB +0.5 +1.2 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +2.2 compare
phage JP1 MOI 10 +0.6 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.4 compare
root root sample 6; outgrowth in LB +0.7 +1.6 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.8 +1.6 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.8 +1.9 compare