Fitness data for PS417_07455 in Pseudomonas simiae WCS417

glutamine amidotransferase
SEED: Glutamine amidotransferase, class-II
KEGG: glutamine amidotransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.1 -1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.0 -1.8 compare
liquid stress Fraxetin 2 mM; liquid stress -1.7 -1.8 compare
carbon source 2-Deoxy-D-Ribose (C) -1.7 -2.1 compare
carbon source L-Valine (C) -1.6 -1.3 compare
carbon source L-Valine (C) -1.5 -1.2 compare
phage P. simiae Grant Run MOI 10 -1.4 -1.3 compare
motility inner cut, LB soft agar motility assay -1.3 -1.9 compare
carbon source Carbon source L-Citrulline 5 mM -1.3 -2.4 compare
liquid stress 80% Methanol 2 mM; liquid stress -1.3 -1.8 compare
seeds Growth on radish seeds for 72 hours +1.3 +1.7 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +1.4 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.4 +2.4 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.4 +2.4 compare
phage P. simiae OR Antrim MOI 10 +1.5 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.5 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.7 +2.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.7 +3.3 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x +1.8 +3.0 compare