Fitness data for PS417_07315 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: LysR-family transcriptional regulator clustered with PA0057

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress methylglyoxal 0.032 vol% -1.2 -3.2 compare
seeds Growth on radish seeds for 72 hours -1.2 -3.2 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.8 -1.9 compare
soil soil sample 2; outgrowth in LB -0.8 -2.4 compare
phage P. simiae ORA MOI 0.1 -0.7 -2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.3 compare
phage P. simiae Grant Run MOI 10 -0.6 -1.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -2.3 compare
carbon source L-Citrulline (C) -0.5 -2.6 compare
carbon source L-Valine (C) -0.5 -1.8 compare
stress Phosphomycin 0.001 mg/ml +0.5 +2.5 compare
stress R2A with Fusaric 120 ug/mL +0.5 +2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +1.7 compare
stress Phosphomycin 0.003 mg/ml +0.7 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +3.5 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) +1.2 +4.2 compare