Fitness data for PS417_00715 in Pseudomonas simiae WCS417

required for octanoate transport, together with NodT, MFP, and FUSC proteins (PS417_00725, PS417_00720, PS417_00710) (from data)
Original annotation: membrane protein
SEED: membrane protein, putative

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source octanoate (C) -3.6 -7.8 compare
carbon source octanoate (C) -3.2 -6.2 compare
stress R2A with Fusaric 120 ug/mL -0.7 -3.5 compare
stress methylglyoxal 0.032 vol% -0.7 -2.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.7 -2.3 compare
stress R2A with Fusaric 120 ug/mL -0.6 -2.7 compare
stress R2A with Fusaric 120 ug/mL -0.6 -3.0 compare
phage Wcs_1 -0.6 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.7 compare
phage JP1 MOI 1 -0.5 -1.7 compare
soil soil sample 7; outgrowth in LB -0.5 -1.9 compare
phage P. simiae OR Antrim MOI 0.1 -0.5 -2.1 compare
stress R2A with Fusaric 120 ug/mL -0.5 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.9 compare
phage P. simiae ORA MOI 0.1 +0.5 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.2 compare
seeds Growth on radish seeds for 24 hours +0.5 +2.3 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.6 +3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.7 compare