Fitness data for PS417_07085 in Pseudomonas simiae WCS417

transcriptional regulator
SEED: Tricarboxylate transport transcriptional regulator TctD
KEGG: two-component system, OmpR family, response regulator TctD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
seeds Growth on radish seeds for 72 hours -1.8 -2.8 compare
stress methylglyoxal 0.032 vol% -1.4 -2.1 compare
phage P. simiae Grant Run MOI 10 -1.2 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.1 -1.6 compare
soil soil sample 7; outgrowth in LB -1.1 -2.0 compare
phage P. simiae OR Antrim MOI 10 -1.1 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -2.1 compare
nophagecontrol Only library -1.0 -2.4 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.0 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -1.9 compare
stress Tetracycline 0.001 mg/ml -0.9 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -2.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.9 -1.5 compare
carbon source L-Valine (C) +0.8 +2.6 compare
phage Wcs_1 +0.8 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.9 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +0.8 compare
seeds Growth on radish seeds for 72 hours +2.0 +2.2 compare
carbon source Trisodium citrate (C) +7.8 +26.6 compare
carbon source Trisodium citrate (C) +7.8 +19.8 compare