Fitness data for PS417_07015 in Pseudomonas simiae WCS417

helicase
SEED: DNA or RNA helicases of superfamily II

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
soil soil sample 3; outgrowth in LB -1.2 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.3 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.9 -2.9 compare
seeds Growth on radish seeds for 24 hours -0.8 -2.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.7 -2.0 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x -0.7 -1.7 compare
liquid stress 80% Methanol 2 mM; liquid stress -0.7 -2.3 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x -0.7 -2.3 compare
phage P. simiae OR1 MOI 0.1 -0.7 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.7 -2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.2 compare
phage P. simiae Grant Run MOI 0.1 +0.8 +2.0 compare
seeds Growth on radish seeds for 72 hours +0.8 +1.4 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.8 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +1.2 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +1.1 +2.5 compare