Fitness data for PS417_06790 in Pseudomonas simiae WCS417

arabinose transporter permease
SEED: Putative sugar transport protein
KEGG: MFS transporter, DHA1 family, arabinose polymer transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.5 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.6 -1.6 compare
soil soil sample 2; outgrowth in LB -0.6 -1.6 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.6 -2.3 compare
phage P. simiae OR Antrim MOI 1 -0.6 -1.8 compare
solid stress Scopoletin 2 mM; solid stress -0.6 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.6 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.5 compare
carbon source Carbon source D-Mannitol 2.5 mM -0.5 -1.7 compare
carbon source Carbon source D-Mannitol 2.5 mM -0.5 -2.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.0 compare
phage JP1 MOI 0.1 +0.6 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +3.1 compare