Fitness data for PS417_06780 in Pseudomonas simiae WCS417

TetR family transcriptional regulator
SEED: Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family
KEGG: TetR/AcrR family transcriptional regulator, acrAB operon repressor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.8)


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group condition fitness t score  
rhizosphere rhizosphere sample 1; outgrowth in LB -3.9 -2.7 compare
soil soil sample 5; outgrowth in LB -3.3 -3.5 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.7 -3.5 compare
stress methylglyoxal 0.032 vol% -2.5 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.1 -3.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.9 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.9 -3.4 compare
soil soil sample 7; outgrowth in LB -1.9 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.8 +1.5 compare
stress Tetracycline 0.001 mg/ml +2.5 +8.6 compare
stress Nalidixic 0.015 mg/ml +2.8 +9.6 compare
stress R2A with Fusaric 120 ug/mL +3.1 +12.4 compare
stress R2A with Fusaric 120 ug/mL +3.1 +11.6 compare
stress R2A with Fusaric 120 ug/mL +3.1 +12.5 compare
stress R2A with Fusaric 120 ug/mL +3.2 +12.2 compare
stress R2A with Fusaric 120 ug/mL +3.3 +14.1 compare
stress R2A with Fusaric 120 ug/mL +3.4 +13.0 compare
stress Nalidixic 0.025 mg/ml +5.0 +20.7 compare
stress Doxycycline hyclate 0.001 mg/ml +5.4 +9.1 compare