Fitness data for PS417_06745 in Pseudomonas simiae WCS417

polysaccharide deacetylase
SEED: Uricase (urate oxidase) (EC 1.7.3.3)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
phage Wcs_1 -1.5 -1.3 compare
seeds Growth on radish seeds for 72 hours -1.5 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -1.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.2 -2.9 compare
phage JP1 MOI 1 -1.1 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -2.0 compare
nophagecontrol Only library -1.1 -1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.1 -1.0 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.1 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.1 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.2 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.1 -0.8 compare
seeds Growth on radish seeds for 72 hours -1.0 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +1.0 compare
carbon source L-Valine (C) +1.0 +0.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.1 compare