Fitness data for PS417_06715 in Pseudomonas simiae WCS417

protocatechuate 3,4-dioxygenase
SEED: Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
KEGG: protocatechuate 3,4-dioxygenase, beta subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. simiae OR1 MOI 0.1 -0.8 -2.7 compare
nitrogen source Adenine (N) -0.6 -3.2 compare
phage Wcs_1 -0.5 -2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.4 -1.7 compare
seeds Growth on radish seeds for 72 hours -0.4 -1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.3 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.4 -2.0 compare
seeds Growth on radish seeds for 24 hours -0.4 -1.8 compare
soil soil sample 4; outgrowth in LB -0.4 -1.6 compare
phage JP1 MOI 10 +0.4 +1.5 compare
carbon source succinate (C) +0.4 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +1.5 compare
phage JP1 MOI 10 +0.4 +1.1 compare
liquid stress Scopoletin 3 mM; liquid stress +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.2 compare
carbon source D-Glucose-6-Phosphate (C) +0.4 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.1 compare