Fitness data for PS417_06665 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: Glycine cleavage system transcriptional activator
KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage Wcs_1 -0.8 -4.4 compare
phage P. simiae OR1 MOI 0.1 -0.6 -2.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.5 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.3 compare
stress Doxycycline hyclate 0.001 mg/ml -0.4 -2.4 compare
phage P. simiae ORA MOI 0.1 -0.4 -2.0 compare
phage Wcs_0.1 -0.4 -2.6 compare
stress Gentamicin 0.008 mg/ml -0.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.5 compare
nitrogen source Adenine (N) -0.4 -1.8 compare
phage P. simiae OR Antrim MOI 0.1 -0.3 -1.8 compare
soil soil sample 5; outgrowth in LB -0.3 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.5 compare
phage P. simiae OR Antrim MOI 0.1 +0.4 +2.3 compare
phage P. simiae Grant Run MOI 0.1 +0.5 +2.0 compare
stress Neomycin 0.04 mg/ml +0.5 +2.9 compare
phage JP1 MOI 0.1 +0.7 +3.3 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.7 +2.9 compare