Fitness data for PS417_06660 in Pseudomonas simiae WCS417

endoribonuclease
SEED: RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
rhizosphere rhizosphere sample 1; outgrowth in LB -0.9 -2.9 compare
seeds Growth on radish seeds for 24 hours -0.9 -3.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.3 compare
soil soil sample 7; outgrowth in LB -0.7 -2.2 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.2 compare
seeds Growth on radish seeds for 72 hours -0.6 -2.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.6 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.1 compare
nitrogen source Adenine (N) -0.5 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5 -1.6 compare
solid stress Scopoletin 3 mM; solid stress -0.5 -2.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.6 compare
stress Gentamicin 0.008 mg/ml +0.6 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.3 compare
stress Neomycin 0.04 mg/ml +0.8 +2.5 compare