Fitness data for PS417_06630 in Pseudomonas simiae WCS417

diguanylate phosphodiesterase
SEED: Sensory box/GGDEF family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.3 compare
solid stress Fraxetin 2 mM; solid stress -0.3 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.4 compare
carbon source L-Isoleucine (C) -0.3 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.3 -1.6 compare
stress LB_noSalt with Chloride 1100 mM +0.3 +2.0 compare
phage P. simiae OR Antrim MOI 0.1 +0.3 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.5 compare
seeds Growth on radish seeds for 72 hours +0.3 +1.8 compare
stress R2A with Fusaric 120 ug/mL +0.3 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +1.9 compare
carbon source succinate (C) +0.4 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +1.8 compare
soil soil sample 8; outgrowth in LB +0.4 +2.3 compare
soil soil sample 7; outgrowth in LB +0.5 +2.3 compare