Fitness data for PS417_06575 in Pseudomonas simiae WCS417

DoxX
SEED: INTEGRAL MEMBRANE PROTEIN (Rhomboid family)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)

group	condition	fitness	t score
root	root sample 6; outgrowth in LB	-0.7	-2.3	compare
soil	soil sample 6; outgrowth in LB	-0.6	-1.4	compare
phage	JP1 MOI 1	-0.6	-1.9	compare
carbon source	Carbon source D-Mannitol 2.5 mM	-0.6	-3.1	compare
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.6	+1.3	compare
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x	+0.6	+2.0	compare
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	+0.6	+1.3	compare
agar plate interaction control	Taped volatile agar plate with no fungus	+0.6	+1.2	compare
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	+0.6	+1.9	compare
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	+0.6	+1.7	compare
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6	+1.2	compare
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.7	+1.6	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.7	+3.8	compare
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.7	+1.6	compare
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	+0.7	+1.7	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.8	+1.7	compare
carbon source	L-Valine (C)	+0.8	+1.4	compare
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.9	+4.3	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.2	+2.5	compare
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.6	+1.2	compare