Fitness data for PS417_06500 in Pseudomonas simiae WCS417

hypothetical protein
SEED: Collagen pro alpha-chain precursor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
rhizosphere rhizosphere sample 2; outgrowth in LB -3.1 -1.4 compare
liquid stress Scopoletin 3 mM; liquid stress -2.6 -2.1 compare
soil soil sample 4; outgrowth in LB -2.6 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.3 -1.4 compare
carbon source L-Valine (C) -2.1 -1.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -2.1 -1.3 compare
root root sample 6; outgrowth in LB -1.7 -1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.7 -1.2 compare
motility inner cut, LB soft agar motility assay -1.6 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.6 -0.8 compare
phage P. simiae OR Antrim MOI 1 -1.6 -1.2 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.5 -1.1 compare
phage P. simiae Grant Run MOI 0.1 -1.5 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.5 -1.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.5 +1.3 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.5 +1.6 compare
carbon source Carbon source D-Mannitol 2.5 mM +1.5 +2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.6 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.7 +1.2 compare