Fitness data for PS417_06460 in Pseudomonas simiae WCS417

TonB-dependent receptor
SEED: FIG00462261: hypothetical protein
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.5 compare
motility inner cut, LB soft agar motility assay -0.4 -2.3 compare
nophagecontrol Only library -0.4 -1.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +1.6 compare
root root sample 6; outgrowth in LB +0.4 +0.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.2 compare
soil soil sample 6; outgrowth in LB +0.5 +1.4 compare
soil soil sample 2; outgrowth in LB +0.5 +1.1 compare
soil soil sample 4; outgrowth in LB +0.5 +1.0 compare
phage P. simiae OR1 MOI 0.1 +0.5 +2.2 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.5 +1.1 compare
soil soil sample 8; outgrowth in LB +0.5 +1.3 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.5 +1.0 compare
soil soil sample 3; outgrowth in LB +0.5 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.7 compare
soil soil sample 5; outgrowth in LB +0.5 +1.5 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.5 +1.0 compare