Fitness data for PS417_06325 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family, in formaldehyde detoxification operon

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
solid stress Fraxetin 3 mM; solid stress -2.8 -10.9 compare
stress methylglyoxal 0.032 vol% -2.2 -3.2 compare
solid stress Fraxetin 3 mM; solid stress -1.7 -6.7 compare
solid stress Fraxetin 3 mM; solid stress -1.7 -8.6 compare
solid stress Fraxetin 3 mM; solid stress -1.6 -4.9 compare
solid stress Fraxetin 2 mM; solid stress -1.1 -4.4 compare
solid stress Fraxetin 2 mM; solid stress -1.0 -4.1 compare
solid stress Fraxetin 2 mM; solid stress -0.9 -4.3 compare
solid stress Fraxetin 2 mM; solid stress -0.8 -4.0 compare
solid stress Fraxetin 2 mM; solid stress -0.8 -3.7 compare
solid stress 80% Methanol 0.5 mM; solid stress -0.6 -3.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.2 compare
seeds Growth on radish seeds for 72 hours -0.6 -1.9 compare
seeds Growth on radish seeds for 72 hours -0.6 -2.5 compare
supernatant control Vogels_fungal_media 0.1X -0.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.3 compare