Fitness data for PS417_06140 in Pseudomonas simiae WCS417

cold-shock protein
SEED: Cold shock protein CspA
KEGG: cold shock protein (beta-ribbon, CspA family)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
rhizosphere rhizosphere sample 2; outgrowth in LB -0.9 -1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -1.6 compare
solid stress Fraxetin 3 mM; solid stress -0.8 -2.1 compare
soil soil sample 8; outgrowth in LB -0.8 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.2 compare
liquid stress 80% Methanol 3 mM; liquid stress -0.8 -2.7 compare
stress Doxycycline hyclate 0.001 mg/ml -0.8 -2.0 compare
carbon source Carbon source L-Citrulline 10 mM -0.8 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +2.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +2.2 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +2.0 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.9 +2.5 compare
phage P. simiae Grant Run MOI 10 +0.9 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.3 +2.2 compare
carbon source Gly-Glu (C) +1.9 +8.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +2.0 +1.3 compare
carbon source Gly-Glu (C) +2.2 +13.7 compare