Fitness data for PS417_06095 in Pseudomonas simiae WCS417

energy transducer TonB
SEED: Periplasmic protein TonB, links inner and outer membranes

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -4.6 -1.2 compare
phage JP1 MOI 10 -4.0 -1.4 compare
nophagecontrol Only library -3.3 -1.7 compare
root root sample 6; outgrowth in LB -2.2 -1.3 compare
phage P. simiae Grant Run MOI 0.1 -2.0 -1.8 compare
phage Wcs_1 -1.9 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -1.5 compare
phage P. simiae Grant Run MOI 0.1 -1.6 -1.6 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -1.5 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.5 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.5 -1.3 compare
motility inner cut, LB soft agar motility assay -1.5 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -1.6 compare
motility inner cut, LB soft agar motility assay -1.4 -1.6 compare
phage P. simiae OR Antrim MOI 0.1 -1.4 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -1.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +1.3 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.3 +2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.5 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.6 +3.3 compare