Fitness data for PS417_06045 in Pseudomonas simiae WCS417

membrane protein
SEED: Outer membrane lipoprotein omp16 precursor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.6 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.6 -0.9 compare
phage P. simiae OR Antrim MOI 0.1 -1.2 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.7 compare
phage P. simiae OR Antrim MOI 0.1 -1.1 -1.4 compare
phage moi 100 Time6-phageFRS -1.1 -2.2 compare
phage P. simiae Grant Run MOI 10 -1.0 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -0.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -1.0 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -2.6 compare
stress Phosphomycin 0.002 mg/ml +1.0 +2.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.0 +1.0 compare
stress Doxycycline hyclate 0.001 mg/ml +1.1 +2.9 compare
seeds Growth on radish seeds for 72 hours +1.1 +1.4 compare
stress Phosphomycin 0.003 mg/ml +1.1 +3.0 compare
carbon source 2'-Deoxyinosine 5 mM (C) +1.1 +2.2 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) +1.4 +3.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +3.0 +1.5 compare