Fitness data for PS417_05950 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: Transcriptional regulators, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Valine (C) -1.1 -3.0 compare
seeds Growth on radish seeds for 72 hours -0.7 -1.9 compare
motility inner cut, LB soft agar motility assay -0.7 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -2.3 compare
phage moi 100 Time6-phageFRS -0.6 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.6 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.5 -2.1 compare
soil soil sample 4; outgrowth in LB -0.5 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -1.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.5 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB +0.5 +2.9 compare
seeds Growth on radish seeds for 72 hours +0.5 +1.1 compare
carbon source Uridine (C) +0.5 +2.4 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.5 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.6 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +1.8 compare
carbon source octanoate (C) +0.6 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.4 compare
stress Paraquat dichloride 0.002 mg/ml +0.6 +2.8 compare
stress Paraquat dichloride 0.008 mg/ml +0.9 +3.9 compare