Fitness data for PS417_05930 in Pseudomonas simiae WCS417

spermidine/putrescine ABC transporter permease
SEED: Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)
KEGG: putative spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.5 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.6 -3.0 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -1.7 compare
soil soil sample 2; outgrowth in LB -0.5 -2.4 compare
phage JP1 MOI 1 -0.5 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.8 compare
soil soil sample 7; outgrowth in LB -0.5 -1.9 compare
root root sample 6; outgrowth in LB -0.5 -2.1 compare
seeds Growth on radish seeds for 72 hours -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -1.8 compare
supernatant control Vogels_fungal_media 0.1X -0.4 -1.3 compare
liquid stress Scopoletin 2 mM; liquid stress -0.4 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.4 -2.3 compare
phage JP1 MOI 10 +0.4 +1.3 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.4 +2.3 compare
stress Gentamicin 0.008 mg/ml +0.5 +1.6 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.6 +2.0 compare