Fitness data for PS417_05915 in Pseudomonas simiae WCS417

spermidine dehydrogenase
SEED: FIG00955623: hypothetical protein
KEGG: spermidine dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -2.1 compare
carbon source octanoate (C) +0.2 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +1.0 compare
solid stress Fraxetin 2 mM; solid stress +0.2 +1.7 compare
carbon source Carbon source D-Mannitol 2.5 mM +0.2 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.2 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +1.3 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.2 +1.7 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.2 +1.6 compare
solid stress Fraxetin 3 mM; solid stress +0.3 +1.7 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.3 +1.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +1.8 compare
liquid stress Scopoletin 3 mM; liquid stress +0.3 +1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.3 +1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.3 +1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.4 compare
solid stress Fraxetin 3 mM; solid stress +0.3 +2.0 compare