Fitness data for PS417_05730 in Pseudomonas simiae WCS417

tail protein
SEED: Phage tail fibers

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Valine (C) -1.4 -2.2 compare
supernatant control Vogels_fungal_media 0.1X -0.8 -2.2 compare
ecofab LB 0.5x in EcoFAB_3.5mL -0.7 -3.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.7 -2.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.3 compare
soil soil sample 4; outgrowth in LB -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.2 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.5 -1.8 compare
soil soil sample 7; outgrowth in LB +0.5 +1.8 compare
phage P. simiae ORA MOI 0.1 +0.5 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.5 compare
stress methylglyoxal 0.032 vol% +0.5 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +0.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.8 compare
seeds Growth on radish seeds for 72 hours +0.8 +1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +1.7 compare
stress Cisplatin 0.01 mg/ml +1.0 +4.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.8 compare