Fitness data for PS417_05680 in Pseudomonas simiae WCS417

DNA mismatch repair protein MutS
SEED: DNA mismatch repair protein MutS
KEGG: DNA mismatch repair protein MutS

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.7 compare
motility inner cut, LB soft agar motility assay -0.5 -2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.3 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -1.7 compare
liquid stress 80% Methanol 3 mM; liquid stress +0.4 +2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +2.4 compare
liquid stress 80% Methanol 3 mM; liquid stress +0.5 +2.7 compare
liquid stress Fraxetin 2 mM; liquid stress +0.5 +3.3 compare
root root sample 6; outgrowth in LB +0.5 +1.8 compare
soil soil sample 2; outgrowth in LB +0.6 +1.6 compare
stress Phosphomycin 0.002 mg/ml +0.6 +2.6 compare
stress Neomycin 0.04 mg/ml +0.7 +5.3 compare
stress methylglyoxal 0.032 vol% +0.8 +3.9 compare
stress Doxycycline hyclate 0.001 mg/ml +1.0 +4.8 compare
stress Gentamicin 0.008 mg/ml +1.2 +5.1 compare
carbon source Trisodium citrate (C) +1.2 +4.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +1.3 +2.4 compare