Fitness data for PS417_05645 in Pseudomonas simiae WCS417

LuxR family transcriptional regulator
SEED: DNA-binding response regulator, LuxR family
KEGG: two-component system, NarL family, response regulator EvgA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Valine (C) -0.9 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.6 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.6 compare
carbon source D-Mannose (C) -0.5 -3.2 compare
phage P. simiae ORA MOI 10 -0.5 -1.6 compare
carbon source Carbon source D-Mannitol 2.5 mM -0.5 -2.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.3 compare
nitrogen source Putrescine (N) +0.5 +2.4 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +1.3 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.5 +1.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.5 +1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.8 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.5 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.8 compare
solid stress 80% Methanol 2 mM; solid stress +0.6 +3.0 compare
seeds Growth on radish seeds for 72 hours +0.6 +1.5 compare