Fitness data for PS417_05560 in Pseudomonas simiae WCS417

ABC transporter
SEED: Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4)
KEGG: glutamate/aspartate transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -2.4 -1.4 compare
phage JP1 MOI 10 -2.3 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.0 -1.9 compare
seeds Growth on radish seeds for 72 hours -1.8 -1.6 compare
soil soil sample 5; outgrowth in LB -1.7 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.7 -1.9 compare
solid stress 80% Methanol 0.5 mM; solid stress -1.4 -2.4 compare
stress L-Lysine 60 mM -1.3 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -1.4 compare
stress Doxycycline hyclate 0.001 mg/ml -1.3 -1.2 compare
phage moi 100 Time6-phageFRS -1.2 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.2 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.3 compare
carbon source RCH2_defined_glucose with MS_media 1x +1.2 +3.8 compare
phage P. simiae OR1 MOI 0.1 +1.3 +1.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.5 +3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.5 +2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.5 +3.2 compare
carbon source L-Glutamine (C) +2.6 +11.9 compare
carbon source L-Glutamine (C) +3.0 +13.3 compare