Fitness data for PS417_05285 in Pseudomonas simiae WCS417

cobalamin biosynthesis protein CobW
SEED: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -0.8 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.1 compare
supernatant control Vogels_fungal_media 0.1X -0.8 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.1 compare
soil soil sample 2; outgrowth in LB -0.6 -1.4 compare
motility outer cut, LB soft agar motility assay -0.6 -1.8 compare
phage P. simiae Grant Run MOI 0.1 +0.6 +2.1 compare
phage P. simiae OR Antrim MOI 1 +0.6 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +0.8 compare
solid stress Fraxetin 1 mM; solid stress +0.6 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +0.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +1.4 compare
phage P. simiae ORA MOI 0.1 +0.7 +1.8 compare
soil soil sample 7; outgrowth in LB +0.7 +2.1 compare
phage P. simiae ORA MOI 10 +0.7 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.6 compare
root root sample 6; outgrowth in LB +1.0 +2.1 compare