Fitness data for PS417_05220 in Pseudomonas simiae WCS417

tRNA methyltransferase
SEED: tRNA (5-methoxyuridine) 34 synthase
KEGG: tRNA (mo5U34)-methyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.0 -2.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.8 -3.2 compare
soil soil sample 7; outgrowth in LB -0.7 -2.5 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.7 -3.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.7 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.6 -2.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -2.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -3.3 compare
solid stress Fraxetin 3 mM; solid stress -0.6 -2.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -2.7 compare
stress LB_noSalt with Chloride 1100 mM -0.5 -2.4 compare
carbon source Gly-Glu (C) -0.5 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.3 compare
phage P. simiae OR Antrim MOI 10 -0.5 -1.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.4 compare
stress LB_noSalt with Chloride 500 mM -0.5 -2.6 compare
stress Polymyxin B sulfate 0.006 mg/ml -0.5 -2.2 compare
solid stress Fraxetin 2 mM; solid stress -0.5 -2.5 compare
stress Doxycycline hyclate 0.001 mg/ml +0.5 +2.8 compare
stress Gentamicin 0.008 mg/ml +0.7 +2.6 compare