| group | condition | fitness | t score | |
|---|
| mixed community no phage control | BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) | -0.6 | -2.1 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) | -0.4 | -1.5 | compare |
| mixed community no phage control | BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) | -0.4 | -1.2 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) | -0.4 | -1.9 | compare |
| mixed community no phage control | BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) | -0.4 | -1.2 | compare |
| no phage control | BHIS no phage control | -0.4 | -1.9 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae | -0.3 | -1.1 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae | -0.3 | -0.9 | compare |
| no phage control | BHIS no phage control | -0.2 | -1.4 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) | +0.3 | +1.2 | compare |
| mixed community no phage control | BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) | +0.3 | +1.1 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) | +0.3 | +1.3 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) | +0.3 | +1.3 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae | +0.3 | +1.7 | compare |
| phage monoculture | BHIS_CaCl2 with hk phage cocktail 1 MOI | +0.3 | +1.7 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with 14 member community | +0.3 | +1.3 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) | +0.4 | +1.4 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) | +0.4 | +1.7 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) | +0.5 | +1.6 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) | +0.5 | +2.2 | compare |