Fitness data for EFB2_03555 in Escherichia fergusonii Becca

HTH-type transcriptional repressor AllR
SEED: Negative regulator of allantoin and glyoxylate utilization operons
KEGG: IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.1)


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group condition fitness t score  
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.3 -2.1 compare
no phage control BHIS no phage control -0.3 -2.1 compare
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.2 -1.5 compare
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.2 -1.3 compare
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI -0.2 -1.4 compare
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.2 -1.3 compare
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae -0.1 -1.1 compare
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.1 -1.0 compare
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.1 -1.0 compare
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.1 -1.0 compare
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 -1.0 compare
mixed community no phage control BHIS no phage control with 14 member community -0.1 -0.9 compare
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.1 -0.9 compare
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 -0.8 compare
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.1 -0.8 compare
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae -0.1 -0.9 compare
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 -0.8 compare
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI -0.1 -0.9 compare
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.1 +0.9 compare
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.1 +1.1 compare