| group | condition | fitness | t score | |
|---|
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) | -1.6 | -3.4 | compare |
| mixed community no phage control | BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) | -1.6 | -2.5 | compare |
| no phage control | BHIS_CaCl2 no phage control | -1.4 | -1.8 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) | -1.3 | -2.9 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) | -1.3 | -2.4 | compare |
| mixed community no phage control | BHIS no phage control with 14 member community | -1.2 | -2.9 | compare |
| mixed community no phage control | BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) | -0.8 | -1.4 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) | -0.8 | -1.6 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) | -0.8 | -1.9 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) | -0.7 | -1.4 | compare |
| phage monoculture | BHIS_CaCl2 with hk phage cocktail 1 MOI | -0.7 | -1.5 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) | -0.7 | -1.6 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) | -0.7 | -1.4 | compare |
| no phage control | BHIS no phage control | -0.7 | -1.6 | compare |
| mixed community no phage control | BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) | -0.6 | -1.7 | compare |
| mixed community no phage control | BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) | -0.6 | -1.4 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) | -0.6 | -1.1 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with 14 member community | +0.6 | +1.7 | compare |
| mixed community no phage control | BHIS no phage control with 14 member community plus Klebsiella pneumoniae | +0.7 | +2.0 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) | +0.9 | +2.3 | compare |