| group | condition | fitness | t score | |
|---|
| no phage control | BHIS_CaCl2 no phage control | -0.2 | -0.9 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) | -0.1 | -0.9 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) | +0.1 | +0.9 | compare |
| no phage control | BHIS no phage control | +0.1 | +1.0 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) | +0.1 | +1.0 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) | +0.1 | +1.0 | compare |
| mixed community no phage control | BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) | +0.1 | +1.0 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) | +0.1 | +1.0 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) | +0.1 | +1.0 | compare |
| phage monoculture | BHIS_CaCl2 with hk phage cocktail 1 MOI | +0.1 | +1.1 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) | +0.1 | +1.2 | compare |
| mixed community no phage control | BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) | +0.1 | +1.2 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) | +0.2 | +1.3 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) | +0.2 | +1.3 | compare |
| mixed community no phage control | BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) | +0.2 | +1.4 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) | +0.2 | +1.4 | compare |
| mixed community no phage control | BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) | +0.2 | +1.5 | compare |
| mixed community no phage control | BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) | +0.2 | +1.7 | compare |
| mixed community no phage control | BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) | +0.2 | +1.9 | compare |
| phage mixed community | phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) | +0.3 | +2.3 | compare |