Fitness data for COO64_RS13755 in Pseudomonas sp. SVBP6

hpaR: homoprotocatechuate degradation operon regulator HpaR
SEED: 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
supernatant control supernatant control, M9 with 0.1X LB -1.0 -2.6 compare
supernatant Supernatant; Pseudomonas DC3000 grown in LB; 0.2 X -0.7 -1.5 compare
supernatant Supernatant; Pseudomonas DC3000 grown in LB; 0.5 X -0.6 -1.4 compare
supernatant M9 with Supernatant; Pseudomonas DC3000 grown in LB 0.5X -0.5 -1.3 compare
supernatant control supernatant control; LB -0.5 -1.3 compare
supernatant control supernatant control, M9 with 0.5X LB -0.4 -1.0 compare
supernatant control supernatant control; LB -0.3 -1.0 compare
mixed community Mixed culture; Pseudomonas DC3000 1:1 with Pseudomonas_SVBP6_ML3 in M9 -0.3 -1.0 compare
mixed community control mixed community control; LB -0.3 -0.7 compare
supernatant Supernatant; Pseudomonas DC3000 grown in LB; 0.5 X -0.3 -0.5 compare
supernatant control supernatant control; LB +0.3 +0.6 compare
supernatant M9 with Supernatant; Pseudomonas DC3000 grown in LB 0.1X +0.3 +1.0 compare
supernatant Supernatant; Pseudomonas DC3000 grown in LB; 0.1 X +0.4 +1.2 compare
supernatant control supernatant control, M9 with 0.5X LB +0.4 +1.3 compare
mixed community Mixed culture; Pseudomonas DC3000 1:1 with Pseudomonas_SVBP6_ML3 in M9 +0.4 +1.4 compare
supernatant Supernatant; Pseudomonas DC3000 grown in LB; 0.1 X +0.5 +1.1 compare
supernatant M9 with Supernatant; Pseudomonas DC3000 grown in LB 0.5X +0.5 +1.7 compare
supernatant control supernatant control, M9 with 0.5X LB +0.6 +1.6 compare
mixed community Mixed culture; Pseudomonas DC3000 1:1 with Pseudomonas_SVBP6_ML3 in LB +0.6 +1.7 compare
supernatant Supernatant; Pseudomonas DC3000 grown in LB; 0.3 X +0.6 +2.2 compare