Fitness data for Atu6171 in Agrobacterium fabrum C58

component of type IV secretion system
SEED: Minor pilin of type IV secretion complex, VirB5
KEGG: type IV secretion system protein VirB5

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.7 compare
stress R2A with Tetracycline 0.002 mM -0.5 -1.8 compare
lb LB -0.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.1 compare
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -1.6 compare
phage phage 99.2 +0.5 +1.6 compare
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.5 +2.1 compare
no phage P3L4 +0.5 +2.2 compare
no phage P4L5 +0.5 +2.7 compare
nitrogen source L-Aspartic Acid (N) +0.5 +2.4 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +2.3 compare
nitrogen source Hydantoin (N) +0.6 +2.1 compare
no phage P3L5 +0.6 +2.7 compare
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +2.0 compare
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +2.6 compare
nitrogen source Nicotinamide (N) +0.6 +2.1 compare
no phage P2L5 +0.7 +2.5 compare
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +3.2 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.8 +3.9 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.9 +5.1 compare