Fitness data for Atu6040 in Agrobacterium fabrum C58

conjugal transfer protein
SEED: Conjugative transfer protein TrbC
KEGG: type IV secretion system protein VirB2

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Dextrin from potato starch (C) -1.3 -2.5 compare
nitrogen source L-Proline (N) -0.9 -2.2 compare
carbon source D-Trehalose (C) -0.7 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.6 -1.3 compare
phage AgroPhage_E10 -0.6 -1.2 compare
carbon source Rhamnogalacturonan - from potato (C) -0.6 -1.5 compare
nitrogen source NAG (N) -0.6 -2.1 compare
carbon source D-Saccharic potassium salt (C) -0.6 -1.1 compare
nitrogen source L-Serine (N) -0.6 -2.2 compare
nitrogen source Putrescine (N) +0.6 +2.1 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +1.7 compare
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +1.4 compare
nitrogen source nitrate (N) +0.6 +2.5 compare
carbon source Cellopentaose (C) +0.6 +2.5 compare
nitrogen source Betaine (N) +0.7 +2.2 compare
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.1 compare
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 +3.0 compare
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 +1.7 compare
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.9 +1.8 compare