Fitness data for Atu4682 in Agrobacterium fabrum C58

D-amino acid dehydrogenase small subunit
SEED: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
KEGG: D-amino-acid dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 -2.5 compare
phage AgroPhage_D04 -0.6 -2.2 compare
phage AgroPhage_D10 -0.6 -2.1 compare
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -2.2 compare
carbon source Lactulose (C) -0.4 -2.8 compare
carbon source 2-6-dihydroxybenzoic (C) -0.4 -2.7 compare
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -1.6 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -2.1 compare
carbon source a-Ketoglutaric (C) -0.4 -2.1 compare
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -1.7 compare
phage AgroPhage_E10 -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.0 compare
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +1.3 compare
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +1.5 compare
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +1.3 compare
nitrogen source DL-2-Aminobutyric (N) +0.4 +1.6 compare
phage AgroPhage_C04 +0.5 +1.7 compare
carbon source D-Saccharic potassium salt (C) +0.5 +2.4 compare
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +1.7 compare
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +2.2 compare